STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM183AFamily with sequence similarity 183 member A. (139 aa)    
Predicted Functional Partners:
CFAP126
Cilia and flagella associated protein 126.
   
 
 0.948
C5orf49
Chromosome 5 open reading frame 49.
   
 
 0.938
C11orf1
Chromosome 11 open reading frame 1.
    
 
 0.911
CFAP77
Cilia and flagella associated protein 77.
    
 
 0.903
TEKT4
Uncharacterized protein.
   
 
 0.866
RIBC2
RIB43A domain with coiled-coils 2.
    
 
 0.863
TEKT1
Tektin 1.
   
 
 0.859
TEKT2
Tektin 2.
   
 
 0.858
IQCD
IQ motif containing D.
    
 
 0.847
C9orf135
Chromosome 9 open reading frame 135.
   
   0.826
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.