STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXD4Homeobox D4. (246 aa)    
Predicted Functional Partners:
HOXA5
Homeobox A5.
   
 
0.795
HOXB7
Homeobox B7.
   
 
0.719
HOXC4
Homeobox C4.
  
 
0.616
HOXB6
Homeobox B6.
   
 
0.583
HOXA7
Homeobox A7.
   
 
0.583
HOXC6
Homeobox C6.
   
 
0.561
HOXB5
Homeobox B5.
   
 
0.545
HOXC5
Homeobox C5.
   
  
0.520
G1LEA7_AILME
Homeobox domain-containing protein.
  
 
0.510
ZNF710
Zinc finger protein 710.
    
 
 0.490
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.