STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LARP4BLa ribonucleoprotein domain family member 4B. (734 aa)    
Predicted Functional Partners:
ZC3H12B
Zinc finger CCCH-type containing 12B.
      
 0.607
ZC3H8
Zinc finger CCCH-type containing 8.
      
 0.607
SARNP
SAP domain containing ribonucleoprotein.
      
 0.606
ZRANB2
Zinc finger Ran-binding domain-containing protein 2; May interfere with constitutive 5'-splice site selection. Belongs to the ZRANB2 family.
     
 0.555
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 
 0.538
LARP6
La ribonucleoprotein domain family member 6.
      
 0.534
THOC3
THO complex 3.
   
  
 0.518
LARP7
La ribonucleoprotein domain family member 7.
    
 
 0.510
ZZEF1
Zinc finger ZZ-type and EF-hand domain containing 1.
   
  
 0.509
HEXIM2
HEXIM P-TEFb complex subunit 2.
      
 0.508
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.