STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXD9Homeobox domain-containing protein. (205 aa)    
Predicted Functional Partners:
HOXD10
Homeobox D10.
   
  
0.688
SMIM15
Small integral membrane protein 15.
      
 0.528
ARHGAP45
Rho GTPase activating protein 45.
      
 0.502
HOXB7
Homeobox B7.
   
 
0.469
L3MBTL3
L3MBTL histone methyl-lysine binding protein 3.
   
 
 0.460
SBNO2
Strawberry notch homolog 2.
      
 0.454
RUFY2
RUN and FYVE domain containing 2.
      
 0.454
MEIS2
Meis homeobox 2.
    
 
 0.444
MEIS1
Meis homeobox 1.
    
 
 0.444
MTX2
Metaxin 2.
      
 0.443
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.