STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIGNL2Uncharacterized protein. (134 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
   
 0.925
IST1
IST1 factor associated with ESCRT-III.
    
 0.721
RNF103-2
Uncharacterized protein.
   
 0.683
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 0.638
YOD1
YOD1 deubiquitinase.
   
 0.595
UBXN1
UBX domain protein 1.
   
 0.577
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
   
 0.569
FAAP100
FA core complex associated protein 100.
   
 0.567
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.544
ATXN3
Josephin domain-containing protein.
   
 0.539
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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