STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YME1L1YME1 like 1 ATPase. (770 aa)    
Predicted Functional Partners:
NDUFA13
YjeF N-terminal domain-containing protein.
   
   0.922
TIMMDC1
Translocase of inner mitochondrial membrane domain containing 1.
   
   0.921
OMA1
OMA1 zinc metallopeptidase.
  
 
 0.819
PARL
Rhomboid domain-containing protein.
   
 
 0.775
TTC16
Tetratricopeptide repeat domain 16.
    
 
 0.774
CLPX
Caseinolytic mitochondrial matrix peptidase chaperone subunit.
  
  
 0.766
STOML2
Stomatin like 2.
   
 0.764
MDH1B
Malate dehydrogenase 1B.
  
  
 0.754
PERM1
Uncharacterized protein.
    
 
 0.752
PHB
Prohibitin.
   
 0.715
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.