STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YME1L1YME1 like 1 ATPase. (770 aa)    
Predicted Functional Partners:
OMA1
OMA1 zinc metallopeptidase.
  
 0.965
NDUFA13
YjeF N-terminal domain-containing protein.
   
   0.933
TIMMDC1
Translocase of inner mitochondrial membrane domain containing 1.
   
 
 0.932
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
   
 0.830
PARL
Rhomboid domain-containing protein.
   
 
 0.817
NDUFA11
Uncharacterized protein.
   
 
 0.812
ATP5F1A
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.810
TIMM9
Translocase of inner mitochondrial membrane 9.
   
 0.799
STOML2
Stomatin like 2.
   
 0.793
IMMT
MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
   
 
 0.769
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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