STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXD13Homeobox D13. (212 aa)    
Predicted Functional Partners:
MCPH1
BRCT domain-containing protein.
      
 0.746
IDH2
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
      
 0.702
RASSF3
Ras association domain family member 3.
      
 0.584
NUP98
Nucleoporin 98.
      
 0.540
HOXD10
Homeobox D10.
   
  
0.520
EVX2
Even-skipped homeobox 2.
   
 
0.505
PHF23
PHD finger protein 23.
      
 0.483
FGF8
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
   
  
 0.475
GLI3
GLI family zinc finger 3.
    
 
 0.466
ARHGAP45
Rho GTPase activating protein 45.
      
 0.452
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.