STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LNPKUncharacterized protein. (237 aa)    
Predicted Functional Partners:
G1M113_AILME
Zinc_ribbon_10 domain-containing protein.
 
      0.900
PDZD8
PDZ domain containing 8.
    
 
 0.556
TMEM179B
Transmembrane protein 179B.
      
 0.506
RETREG3
Reticulophagy regulator family member 3.
    
 
 0.506
TM7SF3
Transmembrane 7 superfamily member 3.
      
 0.485
ATL1
Atlastin GTPase 1.
    
 
 0.453
ITFG1
Uncharacterized protein.
      
 0.452
PRPSAP2
Phosphoribosyl pyrophosphate synthetase associated protein 2.
      
 0.447
ASCC2
Activating signal cointegrator 1 complex subunit 2.
      
 0.447
TRIM55
Tripartite motif containing 55.
    
 
 0.445
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.