STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POFUT2Protein O-fucosyltransferase 2. (387 aa)    
Predicted Functional Partners:
POFUT1
Protein O-fucosyltransferase 1.
     
 0.966
TSR3
Probable ribosome biogenesis protein C16orf42 homolog; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.747
ADAMTSL1
ADAMTS like 1.
     
 0.702
ADAMTSL2
ADAMTS like 2.
     
 0.682
FUT1
L-Fucosyltransferase; Belongs to the glycosyltransferase 11 family.
      
 0.680
ADAMTS20
Peptidase M12B domain-containing protein.
     
 0.659
SPON1
Spondin 1.
     
 0.632
B3GLCT
Beta 3-glucosyltransferase.
      
 0.629
ADAMTS13
ADAM metallopeptidase with thrombospondin type 1 motif 13.
     
 0.628
C2CD5
C2 calcium dependent domain containing 5.
      
 0.586
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.