Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
POFUT2Protein O-fucosyltransferase 2. (387 aa)    
Predicted Functional Partners:
POFUT1
Protein O-fucosyltransferase 1.
   
 
 0.962
SPON1
Spondin 1.
     
 0.730
AGPAT3
1-acylglycerol-3-phosphate O-acyltransferase 3.
      
 0.728
TSR3
Probable ribosome biogenesis protein C16orf42 homolog; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.726
YBEY
YbeY metalloendoribonuclease.
 
 
  
 0.712
CHAF1B
Chromatin assembly factor 1 subunit B.
      
 0.712
B3GLCT
Beta 3-glucosyltransferase.
      
 0.685
ADAMTSL2
ADAMTS like 2.
     
 0.678
THBS1
Thrombospondin 1.
     
 0.674
SBSPON
Somatomedin B and thrombospondin type 1 domain containing.
     
 0.662
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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