STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF445Zinc finger protein 445. (955 aa)    
Predicted Functional Partners:
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
    
 0.710
TRIM28
Tripartite motif containing 28.
   
 0.684
G1LIA0_AILME
Calponin-homology (CH) domain-containing protein.
    
 
 0.579
LIMCH1
LIM zinc-binding domain-containing protein.
    
 
 0.579
ADAMTS10
ADAM metallopeptidase with thrombospondin type 1 motif 10.
      
 0.529
ADAMTS6
ADAM metallopeptidase with thrombospondin type 1 motif 6.
      
 0.529
NAP1L5
Nucleosome assembly protein 1 like 5; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.520
SETDB1
SET domain bifurcated histone lysine methyltransferase 1.
   
 0.511
ALMS1
ALMS1 centrosome and basal body associated protein.
  
  0.511
C4orf47
Chromosome 4 open reading frame 47.
     
 0.484
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.