STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP12Ubiquitin specific peptidase 12; Belongs to the peptidase C19 family. (370 aa)    
Predicted Functional Partners:
WDR48
WD repeat domain 48.
   
 0.941
WDR20
WD repeat domain 20.
   
 0.903
DMWD
DM1 locus, WD repeat containing.
   
 0.755
RPS27A
Ubiquitin-like domain-containing protein.
    
 0.576
FANCD2
FA complementation group D2.
    
 0.567
G1LCV8_AILME
Ribosomal_S27 domain-containing protein.
    
 0.563
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.546
G1L3A2_AILME
Ubiquitin-like domain-containing protein.
    
 0.536
UBA52
Ribosomal protein L40.
    
 0.536
FANCI
FA complementation group I.
   
 0.535
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.