STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHOXShort stature homeobox. (257 aa)    
Predicted Functional Partners:
SOX5
SRY-box transcription factor 5.
    
 
 0.628
PRDM16
PR/SET domain 16.
   
 
 0.550
FOXB1
Forkhead box B1.
   
  
 0.539
TBX15
T-box transcription factor 15.
   
 
 0.528
TBX18
T-box transcription factor 18.
   
 
 0.528
EYA1
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
    
 
 0.476
TBX3
T-box transcription factor 3.
    
 0.475
PLCXD1
Phosphatidylinositol specific phospholipase C X domain containing 1.
      
 0.457
NKX2-8
NK2 homeobox 8.
    
 
 0.452
SOX11
Transcription factor SOX.
      
 0.449
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.