Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SHOXShort stature homeobox. (257 aa)    
Predicted Functional Partners:
PRDM16
PR/SET domain 16.
   
 0.559
SOX5
SRY-box transcription factor 5.
    
 
 0.558
PKNOX1
PBX/knotted 1 homeobox 1.
    
 
 0.485
BANP
BTG3 associated nuclear protein.
    
 
 0.478
OTP
Orthopedia homeobox.
   
  
 0.443
G1MM36_AILME
Uncharacterized protein.
   
 0.443
FOXB1
Forkhead box B1.
   
  
 0.440
TBX15
T-box transcription factor 15.
   
 0.437
TBX18
T-box transcription factor 18.
   
 0.437
FOXB2
Forkhead box B2.
   
  
 0.419
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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