Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
METAP1D | SLC15A4 | ENSAMEP00000013735 | ENSAMEP00000002003 | Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | Solute carrier family 15 member 4. | 0.436 |
NADK | SLC15A4 | ENSAMEP00000014358 | ENSAMEP00000002003 | NAD kinase. | Solute carrier family 15 member 4. | 0.488 |
SLC15A4 | METAP1D | ENSAMEP00000002003 | ENSAMEP00000013735 | Solute carrier family 15 member 4. | Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | 0.436 |
SLC15A4 | NADK | ENSAMEP00000002003 | ENSAMEP00000014358 | Solute carrier family 15 member 4. | NAD kinase. | 0.488 |
SLC15A4 | SLC26A10 | ENSAMEP00000002003 | ENSAMEP00000005512 | Solute carrier family 15 member 4. | Solute carrier family 26 member 10. | 0.458 |
SLC15A4 | TXNDC5 | ENSAMEP00000002003 | ENSAMEP00000018308 | Solute carrier family 15 member 4. | Thioredoxin domain containing 5; Belongs to the protein disulfide isomerase family. | 0.453 |
SLC26A10 | SLC15A4 | ENSAMEP00000005512 | ENSAMEP00000002003 | Solute carrier family 26 member 10. | Solute carrier family 15 member 4. | 0.458 |
TXNDC5 | SLC15A4 | ENSAMEP00000018308 | ENSAMEP00000002003 | Thioredoxin domain containing 5; Belongs to the protein disulfide isomerase family. | Solute carrier family 15 member 4. | 0.453 |