Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HLA-DPA1Major histocompatibility complex, class II, DP alpha 1; Belongs to the MHC class II family. (259 aa)    
Predicted Functional Partners:
HLA-DMA
Major histocompatibility complex, class II, DM alpha; Belongs to the MHC class II family.
   
0.997
G1L599_AILME
Ig-like domain-containing protein.
   
0.997
CD74
CD74 molecule.
   
 0.945
RPS14
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
 0.917
G1LYV0_AILME
Uncharacterized protein.
   
 0.917
CD4
Ig-like domain-containing protein.
   
 0.915
LOC100463773
Ig-like domain-containing protein; Belongs to the MHC class II family.
   
 
 0.893
LAG3
Lymphocyte activating 3.
    
 0.871
G1L5S3_AILME
Ig-like domain-containing protein.
   
0.849
HLA-DQB2
Major histocompatibility complex, class II, DQ beta 2.
   
0.849
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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