STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSPH1Radial spoke head component 1. (314 aa)    
Predicted Functional Partners:
RSPH9
Radial spoke head 9 homolog.
   
 
 0.903
RSPH3
Radial spoke head 3.
   
 
 0.827
RSPH6A
Radial spoke head 6 homolog A.
   
 
 0.777
RSPH4A
Radial spoke head component 4A.
   
 
 0.777
CCDC40
Coiled-coil domain containing 40.
   
 
 0.648
G1L6C6_AILME
ASH domain-containing protein.
    
 
 0.632
CCDC151
Coiled-coil domain containing 151.
   
  
 0.620
SPAG1
Sperm associated antigen 1.
   
 
 0.613
ZMYND10
Zinc finger MYND-type containing 10.
   
 
 0.612
LRRC18
Leucine rich repeat containing 18.
    
 
 0.596
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.