STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCEA2Transcription elongation factor A2. (300 aa)    
Predicted Functional Partners:
POLR2E
RNA polymerase II subunit E.
   
 0.853
POLR2F
RNA polymerase II subunit F.
   
 0.850
POLR2J
RNA polymerase II subunit J.
   
 0.850
POLR2K
RNA polymerase II subunit K.
   
 0.847
POLR2C
RNA polymerase II subunit C.
   
 0.845
POLR2D
RNA polymerase II subunit D.
   
 0.844
POLR2B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.842
GTF2B
General transcription factor IIB.
   
 0.842
POLR2I
RNA polymerase II subunit I; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.839
POLR2H
DNA-directed RNA polymerase II polypeptide H.
   
 0.838
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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