STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYEF2Myelin expression factor 2. (557 aa)    
Predicted Functional Partners:
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
    
 
 0.790
POLR2K
RNA polymerase II subunit K.
   
 0.723
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.603
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.586
HNRNPUL1
Heterogeneous nuclear ribonucleoprotein U like 1.
   
 0.569
LSM5
U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.
   
 
 0.560
RELCH
RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing.
   
 
 0.553
GIN1
Gypsy retrotransposon integrase 1.
    
 
 0.534
ZRSR2
Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2.
   
 0.523
EIF4H
Eukaryotic translation initiation factor 4H.
      
 0.504
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.