GALNT6 protein (Ailuropoda melanoleuca) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

GALNT6

Polypeptide N-acetylgalactosaminyltransferase. (634 aa)

Predicted Functional Partners:

ST6GALNAC1

0.922

GCNT3

0.854

GCNT1

0.854

FGF23

0.853

C1GALT1C1

0.844

C1GALT1

0.818

G1M7Z2_AILME

0.810

B3GNT3

0.806

B3GNT6

0.806

GALNT16

0.745

Your Current Organism:

Ailuropoda melanoleuca

NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B3GNT3	C1GALT1	ENSAMEP00000011337	ENSAMEP00000017275	Hexosyltransferase.	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.	0.722
B3GNT3	C1GALT1C1	ENSAMEP00000011337	ENSAMEP00000020913	Hexosyltransferase.	C1GALT1 specific chaperone 1.	0.866
B3GNT3	G1M7Z2_AILME	ENSAMEP00000011337	ENSAMEP00000015462	Hexosyltransferase.	Uncharacterized protein.	0.722
B3GNT3	GALNT16	ENSAMEP00000011337	ENSAMEP00000015296	Hexosyltransferase.	Polypeptide N-acetylgalactosaminyltransferase.	0.814
B3GNT3	GALNT6	ENSAMEP00000011337	ENSAMEP00000002113	Hexosyltransferase.	Polypeptide N-acetylgalactosaminyltransferase.	0.806
B3GNT3	GCNT1	ENSAMEP00000011337	ENSAMEP00000020084	Hexosyltransferase.	Glucosaminyl (N-acetyl) transferase 1.	0.666
B3GNT3	GCNT3	ENSAMEP00000011337	ENSAMEP00000019725	Hexosyltransferase.	Glucosaminyl (N-acetyl) transferase 3, mucin type.	0.666
B3GNT3	ST6GALNAC1	ENSAMEP00000011337	ENSAMEP00000010943	Hexosyltransferase.	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.	0.842
B3GNT6	C1GALT1	ENSAMEP00000019981	ENSAMEP00000017275	Hexosyltransferase.	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.	0.722
B3GNT6	C1GALT1C1	ENSAMEP00000019981	ENSAMEP00000020913	Hexosyltransferase.	C1GALT1 specific chaperone 1.	0.866
B3GNT6	G1M7Z2_AILME	ENSAMEP00000019981	ENSAMEP00000015462	Hexosyltransferase.	Uncharacterized protein.	0.722
B3GNT6	GALNT16	ENSAMEP00000019981	ENSAMEP00000015296	Hexosyltransferase.	Polypeptide N-acetylgalactosaminyltransferase.	0.814
B3GNT6	GALNT6	ENSAMEP00000019981	ENSAMEP00000002113	Hexosyltransferase.	Polypeptide N-acetylgalactosaminyltransferase.	0.806
B3GNT6	GCNT1	ENSAMEP00000019981	ENSAMEP00000020084	Hexosyltransferase.	Glucosaminyl (N-acetyl) transferase 1.	0.666
B3GNT6	GCNT3	ENSAMEP00000019981	ENSAMEP00000019725	Hexosyltransferase.	Glucosaminyl (N-acetyl) transferase 3, mucin type.	0.666
B3GNT6	ST6GALNAC1	ENSAMEP00000019981	ENSAMEP00000010943	Hexosyltransferase.	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.	0.842
C1GALT1	B3GNT3	ENSAMEP00000017275	ENSAMEP00000011337	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.	Hexosyltransferase.	0.722
C1GALT1	B3GNT6	ENSAMEP00000017275	ENSAMEP00000019981	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.	Hexosyltransferase.	0.722
C1GALT1	C1GALT1C1	ENSAMEP00000017275	ENSAMEP00000020913	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.	C1GALT1 specific chaperone 1.	0.930
C1GALT1	GALNT16	ENSAMEP00000017275	ENSAMEP00000015296	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.	Polypeptide N-acetylgalactosaminyltransferase.	0.805