STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX19Sorting nexin 19. (1003 aa)    
Predicted Functional Partners:
STARD3NL
STARD3 N-terminal like.
      
 0.706
PPT2
Palmitoyl-protein thioesterase 2.
      
 0.699
TXLNG
Taxilin gamma.
      
 0.530
ZFYVE27
Zinc finger FYVE-type containing 27.
      
 0.529
PPP4R2
Protein phosphatase 4 regulatory subunit 2.
   
  
 0.529
TSNARE1
t-SNARE domain containing 1.
      
 0.527
STARD3
StAR related lipid transfer domain containing 3.
      
 0.525
MDM1
Mdm1 nuclear protein.
      
 0.521
ZDHHC21
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.509
RGS21
Regulator of G protein signaling 21.
     
 0.507
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.