STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHAF1AChromatin assembly factor 1 subunit A. (950 aa)    
Predicted Functional Partners:
CHAF1B
Chromatin assembly factor 1 subunit B.
   
 0.951
MCM5
DNA helicase; Belongs to the MCM family.
   
  
 0.836
MCM3
DNA helicase; Belongs to the MCM family.
   
  
 0.836
MCM2
DNA helicase; Belongs to the MCM family.
   
 
 0.827
MCM4
DNA helicase; Belongs to the MCM family.
   
 
 0.780
RBBP4
WD_REPEATS_REGION domain-containing protein.
   
 0.756
CXXC1
CXXC finger protein 1.
      
 0.750
ASF1A
Anti-silencing function 1A histone chaperone.
   
 
 0.739
POLA1
DNA polymerase.
   
 
 0.734
ASF1B
Anti-silencing function 1B histone chaperone.
   
 
 0.732
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.