STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAP1Transporter 1, ATP binding cassette subfamily B member. (811 aa)    
Predicted Functional Partners:
TAPBP
TAP binding protein.
   
 0.991
PDIA3
Protein disulfide-isomerase.
   
 0.953
PSMB9
Proteasome subunit beta.
 
 
 0.948
CALR
Calreticulin.
   
 0.946
TAP2
Uncharacterized protein.
  
  
 
0.908
PSMB8
Proteasome subunit beta.
 
 
 0.856
NLRC5
NLR family CARD domain containing 5.
   
  
 0.721
IRF1
Interferon regulatory factor 1.
   
 
 0.691
STAT1
Signal transducer and activator of transcription.
   
  
 0.672
TNFRSF11A
TNF receptor superfamily member 11a.
   
 
 0.588
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.