STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFF2Trefoil factor 2. (129 aa)    
Predicted Functional Partners:
CBLIF
Cobalamin binding intrinsic factor.
   
  
 0.774
REG4
Regenerating family member 4.
   
  
 0.665
ANXA10
Annexin A10.
   
  
 0.592
GKN2
Gastrokine 2.
   
  
 0.558
GAST
Gastrin.
   
  
 0.552
GCNT4
Glucosaminyl (N-acetyl) transferase 4.
      
 0.530
MEX3A
Mex-3 RNA binding family member A.
      
 0.525
CLPS
Colipase.
   
  
 0.515
GKN1
Gastrokine 1.
   
  
 0.504
GPRC5B
G protein-coupled receptor class C group 5 member B.
      
 0.491
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.