Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TFF3Trefoil factor 3. (76 aa)    
Predicted Functional Partners:
FCGBP
Uncharacterized protein.
   
 
 0.764
ZAN
Zonadhesin (gene/pseudogene).
   
 
 0.764
ZNF185
Zinc finger protein 185 with LIM domain.
      
 0.743
OLFM4
Olfactomedin 4.
      
 0.593
PCBD1
Pterin-4 alpha-carbinolamine dehydratase 1.
    
   0.581
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
      
 0.568
C3
Complement C3.
      
 0.568
NEB
Nebulin.
      
 0.563
ESR1
Estrogen receptor 1.
    
 0.526
UBASH3A
Ubiquitin associated and SH3 domain containing A.
      
 0.503
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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