STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFF3Trefoil factor 3. (76 aa)    
Predicted Functional Partners:
NEB
Nebulin.
      
 0.750
FCGBP
Uncharacterized protein.
    
 
 0.556
OLFM4
Olfactomedin 4.
      
 0.547
CDX1
Caudal type homeobox 1.
      
 0.544
SPDEF
SAM pointed domain containing ETS transcription factor.
   
  
 0.541
AGR2
Anterior gradient 2, protein disulphide isomerase family member.
   
  
 0.527
REG4
Regenerating family member 4.
   
  
 0.526
CHGA
Chromogranin A.
      
 0.524
LGALS2
Galectin.
      
 0.517
SPINK4
Serine peptidase inhibitor, Kazal type 4.
   
  
 0.513
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.