Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CTSDPeptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (385 aa)    
Predicted Functional Partners:
CTSB
Cathepsin B; Belongs to the peptidase C1 family.
   
 0.940
CTSZ
Cathepsin Z; Belongs to the peptidase C1 family.
   
 0.933
BCL2
BCL2 apoptosis regulator.
     
 0.920
BCL2L1
BCL2 like 1.
     
 0.905
CTSV
Cathepsin V; Belongs to the peptidase C1 family.
   
 0.883
CTSA
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.851
CTSH
Cathepsin H; Belongs to the peptidase C1 family.
   
 0.849
CTSS
Cathepsin S; Belongs to the peptidase C1 family.
   
 0.848
BID
BH3-interacting domain death agonist; Counters the protective effect of Bcl-2.
   
 
 0.814
BIRC5
Baculoviral IAP repeat containing 5.
    
 0.811
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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