STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX19ADEAD-box helicase 19A. (476 aa)    
Predicted Functional Partners:
GLE1
GLE1 RNA export mediator.
    
 
 0.732
NUP214
Nucleoporin 214.
    
 
 0.731
VPS4A
Uncharacterized protein; Belongs to the AAA ATPase family.
      
 0.526
CTIF
Cap binding complex dependent translation initiation factor.
    
   0.495
MIF4GD
MIF4G domain containing.
    
   0.495
XPO1
Exportin 1.
    
 
 0.468
PUDP
Pseudouridine 5'-phosphatase.
      
 0.465
DHX40
DEAH-box helicase 40.
   
  
 0.447
NUP88
Nucleoporin 88.
   
 
 0.441
DDX49
DEAD-box helicase 49; Belongs to the DEAD box helicase family.
  
 
 
0.422
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.