Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PEX1Peroxisomal biogenesis factor 1. (1268 aa)    
Predicted Functional Partners:
PEX6
Peroxisomal biogenesis factor 6.
   
 0.992
PEX26
Peroxisomal biogenesis factor 26.
    
 0.975
PEX12
Peroxisomal biogenesis factor 12.
    
 0.940
PEX13
Peroxisomal biogenesis factor 13.
    
 0.940
PEX14
Peroxisomal biogenesis factor 14.
    
 0.935
PEX10
Peroxisomal biogenesis factor 10.
   
 0.926
PEX5
Peroxisomal biogenesis factor 5.
   
 0.893
PEX5L
Peroxisomal biogenesis factor 5 like.
   
 0.873
FAM185A
Family with sequence similarity 185 member A.
    
 0.818
PEX2
Peroxisomal biogenesis factor 2.
    
 0.794
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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