STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC38Coiled-coil domain containing 38. (565 aa)    
Predicted Functional Partners:
CCDC40
Coiled-coil domain containing 40.
      
 0.580
CCDC39
Coiled-coil domain containing 39.
      
 0.564
CCDC116
Uncharacterized protein.
      
 0.537
G1LNW0_AILME
DUF4201 domain-containing protein.
      
 0.514
NAALADL1
N-acetylated alpha-linked acidic dipeptidase like 1.
      
 0.514
RBP1
Retinol binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
      
 0.507
DMRTA1
DMRT like family A1.
      
 0.505
ARMC12
Armadillo repeat containing 12.
      
 0.497
CCDC113
Coiled-coil domain containing 113.
      
 0.493
CCDC146
Coiled-coil domain containing 146.
      
 0.487
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.