STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G1L5X8_AILMEUncharacterized protein. (279 aa)    
Predicted Functional Partners:
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.578
PTBP1
Polypyrimidine tract binding protein 1.
   
 0.569
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.533
ALYREF
Aly/REF export factor.
   
 0.530
G1L799_AILME
Uncharacterized protein.
   
 0.513
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.498
SRSF2
RRM domain-containing protein.
   
 0.498
G1LCM0_AILME
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.497
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.497
G1MP61_AILME
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.497
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.