STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS8Peptidase M12B domain-containing protein. (777 aa)    
Predicted Functional Partners:
G1L4C0_AILME
GON domain-containing protein.
 
 
 
 0.897
HAPLN4
Hyaluronan and proteoglycan link protein 4.
      
 0.639
HAPLN3
Hyaluronan and proteoglycan link protein 3.
   
  
 0.552
PGAP6
Transmembrane protein 8A.
      
 0.527
TSKU
Tsukushi, small leucine rich proteoglycan.
      
 0.522
BCAN
Brevican.
     
 0.476
HAPLN2
Hyaluronan and proteoglycan link protein 2.
      
 0.471
POFUT2
Protein O-fucosyltransferase 2.
     
 0.463
KLK12
Kallikrein related peptidase 12; Belongs to the peptidase S1 family.
      
 0.457
FARP2
FERM, ARH/RhoGEF and pleckstrin domain protein 2.
      
 0.453
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.