STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLD6Phospholipase D family member 6. (233 aa)    
Predicted Functional Partners:
TDRKH
Tudor and KH domain containing.
    
 
 0.763
PNLDC1
PARN like, ribonuclease domain containing 1.
      
 0.759
RHBDD3
Rhomboid domain containing 3.
   
  
 0.718
CNRIP1
Cannabinoid receptor interacting protein 1.
      
 0.694
FAM118A
Family with sequence similarity 118 member A.
   
  
 0.686
PISD
Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine.
   
 0.678
GPAT2
Glycerol-3-phosphate acyltransferase 2, mitochondrial.
  
 
 0.646
ASZ1
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
   
  
 0.621
TMEM39B
Transmembrane protein 39B.
      
 0.619
LETM2
Leucine zipper and EF-hand containing transmembrane protein 2.
      
 0.619
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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