STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGD6FYVE, RhoGEF and PH domain containing 6. (1424 aa)    
Predicted Functional Partners:
GCSAM
Germinal center associated signaling and motility.
      
 0.694
GGT5
Gamma-glutamyltransferase 5.
      
 0.631
ARHGEF38
Rho guanine nucleotide exchange factor 38.
     
 0.624
MOCOS
Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.
      
 0.614
ARHGEF16
Rho guanine nucleotide exchange factor 16.
   
  
 0.613
POC1B
POC1 centriolar protein B.
    
 
 0.608
UPK3A
Uroplakin 3A.
      
 0.605
GIT1
GIT ArfGAP 1.
      
 0.603
RHOBTB1
Rho related BTB domain containing 1.
    
 0.566
CLNK
Cytokine dependent hematopoietic cell linker.
      
 0.558
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: low (12%) [HD]