STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM260Transmembrane protein 260. (698 aa)    
Predicted Functional Partners:
HEATR4
HEAT repeat containing 4.
      
 0.726
TBC1D14
TBC1 domain family member 14.
      
 0.678
AURKAIP1
Aurora kinase A interacting protein 1.
      
 0.643
NHEJ1
Non-homologous end joining factor 1.
      
 0.600
SH2D4A
SH2 domain containing 4A.
      
 0.600
CPT2
Carnitine palmitoyltransferase 2; Belongs to the carnitine/choline acetyltransferase family.
      
 0.522
HDAC6
Histone deacetylase 6.
      
 0.516
SORCS3
Sortilin related VPS10 domain containing receptor 3.
      
 0.500
TMTC1
Transmembrane O-mannosyltransferase targeting cadherins 1.
      
 0.492
SH2D4B
SH2 domain containing 4B.
      
 0.481
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.