STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C12orf29Chromosome 12 open reading frame 29. (328 aa)    
Predicted Functional Partners:
C12orf50
Chromosome 12 open reading frame 50.
      
 0.701
ZNF644
Zinc finger protein 644.
      
 0.700
SLCO5A1
Solute carrier organic anion transporter family member.
      
 0.688
RCAN2
Regulator of calcineurin 2.
      
 0.604
PANDA_007631
Uncharacterized protein.
      
 0.604
TMTC3
Transmembrane O-mannosyltransferase targeting cadherins 3.
   
  
 0.594
RCAN3
RCAN family member 3.
      
 0.528
PRORP
PRORP domain-containing protein.
      
 0.521
COMMD8
COMM domain containing 8.
      
 0.516
KHDRBS2
KH RNA binding domain containing, signal transduction associated 2.
      
 0.482
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.