STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODF4Uncharacterized protein. (237 aa)    
Predicted Functional Partners:
CABYR
Calcium binding tyrosine phosphorylation regulated.
      
 0.648
ODF3
Outer dense fiber of sperm tails 3.
      
 0.604
ODF2
Outer dense fiber of sperm tails 2.
      
 0.585
ODF1
Outer dense fiber of sperm tails 1.
   
  
 0.563
PKDREJ
Polycystin family receptor for egg jelly.
      
 0.559
SPEM1
Spermatid maturation 1.
   
  
 0.551
LY6H
Lymphocyte antigen 6 family member H.
      
 0.537
ODF3B
Outer dense fiber of sperm tails 3B.
      
 0.488
ARL13B
ADP ribosylation factor like GTPase 13B.
      
 0.465
SLC26A8
Testis anion transporter 1.
      
 0.429
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.