STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRTNSprT-like N-terminal domain. (491 aa)    
Predicted Functional Partners:
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.985
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.977
FBXO28
F-box protein 28.
   
    0.920
UBB
Ubiquitin B.
   
  0.916
PTEN
Phosphatase and tensin homolog.
   
    0.890
G1LZ63_AILME
Uncharacterized protein.
   
    0.890
RFC1
Replication factor C subunit 1.
   
 0.852
RFC3
Replication factor C subunit 3.
   
 0.840
PPP2R3B
EF-hand domain-containing protein.
   
    0.828
G1LI18_AILME
EF-hand domain-containing protein.
   
    0.828
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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