STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BORCS6BLOC-1 related complex subunit 6. (293 aa)    
Predicted Functional Partners:
KXD1
KxDL motif containing 1.
   
 
 0.721
BORCS8
Uncharacterized protein.
   
 
 0.674
NDEL1
NudE neurodevelopment protein 1 like 1.
    
 
 0.637
MPDU1
Mannose-P-dolichol utilization defect 1.
      
 0.620
BORCS5
BLOC-1 related complex subunit 5.
    
 
 0.571
BLOC1S1
Uncharacterized protein.
    
 
 0.570
G1MHN2_AILME
Uncharacterized protein.
    
 
 0.564
TRAPPC1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
      
 0.538
ALOXE3
Arachidonate lipoxygenase 3.
      
 0.526
BLOC1S2
Biogenesis of lysosomal organelles complex 1 subunit 2.
    
 
 0.523
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.