STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPGS1Tubulin polyglutamylase complex subunit 1. (290 aa)    
Predicted Functional Partners:
TTC13
Tetratricopeptide repeat domain 13.
      
 0.923
LRRC49
Leucine rich repeat containing 49.
    
 0.833
NICN1
Uncharacterized protein.
    
 0.814
TTLL1
Tubulin tyrosine ligase like 1.
    
 0.797
TPGS2
Tubulin polyglutamylase complex subunit 2.
    
 0.754
GPRIN1
Uncharacterized protein.
      
 0.745
CCDC177
Coiled-coil domain containing 177.
      
 0.681
REX1BD
Required for excision 1-B domain containing.
   
  
 0.632
TTL
Tubulin tyrosine ligase.
    
 0.518
TTLL5
Tubulin tyrosine ligase like 5.
    
 0.517
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.