STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MINDY3MINDY lysine 48 deubiquitinase 3. (446 aa)    
Predicted Functional Partners:
RWDD1
RWD domain containing 1.
      
 0.676
UBL7
Ubiquitin like 7.
    
 
 0.625
ZUP1
Zinc finger containing ubiquitin peptidase 1.
      
 0.606
CLUAP1
Clusterin associated protein 1.
      
 0.603
CCDC97
Coiled-coil domain containing 97.
      
 0.603
CHAC2
Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
      
 0.583
GORASP1
Golgi reassembly stacking protein 1.
      
 0.521
NFU1
NFU1 iron-sulfur cluster scaffold.
      
 0.521
AAMP
Angio associated migratory cell protein.
      
 0.519
ZNF48
Zinc finger protein 48.
      
 0.502
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.