STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF398Zinc finger protein 398. (642 aa)    
Predicted Functional Partners:
TTPAL
Alpha tocopherol transfer protein like.
    
 
 0.636
TTPA
Alpha tocopherol transfer protein.
    
 
 0.636
EMG1
EMG1 N1-specific pseudouridine methyltransferase.
    
 
 0.615
YPEL3
Protein yippee-like; Belongs to the yippee family.
      
 0.614
TDP2
Tyrosyl-DNA phosphodiesterase 2.
      
 0.608
TADA3
Transcriptional adaptor 3.
    
 
 0.564
BAG4
BCL2 associated athanogene 4.
      
 0.526
YPEL4
Protein yippee-like; Belongs to the yippee family.
      
 0.523
PCMT1
Protein-L-isoaspartate O-methyltransferase.
   
  
 0.491
GPANK1
G-patch domain and ankyrin repeats 1.
      
 0.487
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.