STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STX6t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (255 aa)    
Predicted Functional Partners:
VAMP4
Vesicle associated membrane protein 4.
    
 0.995
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.990
VTI1B
Vesicle transport through interaction with t-SNAREs 1B.
   
 0.966
STX16-NPEPL1
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.960
VAMP8
Vesicle associated membrane protein 8.
    
 0.900
STX12
Syntaxin 12; Belongs to the syntaxin family.
    
 0.887
SNAP29
Synaptosome associated protein 29.
    
 0.867
VAMP3
Vesicle associated membrane protein 3.
    
 0.832
STX7
Syntaxin 7; Belongs to the syntaxin family.
    
 0.820
NAPB
NSF attachment protein beta.
    
 0.817
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.