STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM13AFamily with sequence similarity 13 member A. (599 aa)    
Predicted Functional Partners:
PANDA_006102
Rho-GAP domain-containing protein.
 
    
 0.826
FAM43A
Family with sequence similarity 43 member A.
      
 0.632
CRACD
KIAA1211.
      
 0.611
MUC20
Uncharacterized protein.
      
 0.608
SCLY
Selenocysteine lyase.
      
 0.607
SIRT1
Sirtuin 1.
      
 0.582
MYPN
Myopalladin.
     
 0.576
HERC3
HECT domain-containing protein.
      
 0.549
HTR1E
5-hydroxytryptamine receptor 1E.
      
 0.544
GPR12
G protein-coupled receptor 12; Belongs to the G-protein coupled receptor 1 family.
      
 0.527
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.