STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FASTKD2FAST kinase domains 2. (691 aa)    
Predicted Functional Partners:
NGRN
Neugrin, neurite outgrowth associated.
    
 
 0.856
RPUSD3
RNA pseudouridine synthase D3.
   
 
 0.790
TRUB2
TruB pseudouridine synthase family member 2.
   
 
 0.784
MTERF3
Mitochondrial transcription termination factor 3.
   
 
 0.779
DDX28
DEAD-box helicase 28.
   
 
 0.767
DHX30
DExH-box helicase 30.
   
  
 0.751
CPO
Carboxypeptidase O.
      
 0.717
DYTN
EF-hand_3 domain-containing protein.
      
 0.715
RPUSD4
PseudoU_synth_2 domain-containing protein.
   
 
 0.695
G1LH80_AILME
PseudoU_synth_2 domain-containing protein.
   
 
 0.695
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.