STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHX4LIM homeobox 4. (390 aa)    
Predicted Functional Partners:
ISL1
ISL LIM homeobox 1.
   
0.748
ISL2
ISL LIM homeobox 2.
   
0.748
LDB1
LIM domain binding 1.
    
 0.667
ALX3
ALX homeobox 3.
   
0.651
LDB2
LIM domain binding 2.
    
 0.568
POU1F1
POU domain protein.
   
 
 0.565
ISOC1
Isochorismatase domain containing 1.
      
 0.550
ZBTB34
Zinc finger and BTB domain containing 34.
   
 
 0.546
WWC1
WW and C2 domain containing 1.
      
 0.526
CCDC136
Coiled-coil domain containing 136.
      
 0.505
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.