STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF150Ring finger protein 150. (436 aa)    
Predicted Functional Partners:
SNX15
Sorting nexin 15.
   
  
 0.752
VWA5A
Von Willebrand factor A domain containing 5A.
   
 0.735
TMEM63C
Transmembrane protein 63C.
      
 0.722
RNF145
Ring finger protein 145.
    
 
 0.696
TBC1D9
TBC1 domain family member 9.
 
    
 0.695
PXMP2
Peroxisomal membrane protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.682
RNF185
Ring finger protein 185.
      
 0.677
CCDC106
Coiled-coil domain containing 106.
      
 0.639
TRIM59
Uncharacterized protein.
     
 0.614
USP54
Ubiquitin specific peptidase 54.
      
 0.605
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.