STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNAT1MNAT1 component of CDK activating kinase. (309 aa)    
Predicted Functional Partners:
CCNH
Cyclin H; Belongs to the cyclin family.
   
 0.999
CDK7
Cyclin dependent kinase 7; Belongs to the protein kinase superfamily.
   
 0.998
LOC100465141
General transcription factor IIH subunit.
   
 0.993
GTF2H4
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.992
GTF2H3
General transcription factor IIH subunit 3.
    
 0.992
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
    
 0.992
GTF2H1
General transcription factor IIH subunit 1.
    
 0.992
GTF2E2
General transcription factor IIE subunit 2.
   
 0.989
ERCC2
ERCC excision repair 2, TFIIH core complex helicase subunit.
    
 0.989
GTF2E1
General transcription factor IIE subunit 1.
    
 0.987
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.