STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PYURFPIGY upstream reading frame. (112 aa)    
Predicted Functional Partners:
PIGH
Phosphatidylinositol glycan anchor biosynthesis class H.
     
 0.934
PIGQ
Phosphatidylinositol glycan anchor biosynthesis class Q.
     
 0.923
DPM2
Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.
   
 
 0.885
PIGA
Phosphatidylinositol glycan anchor biosynthesis class A.
    
 0.876
PIGC
Phosphatidylinositol glycan anchor biosynthesis class C.
     
 0.857
PIGW
Phosphatidylinositol-glycan biosynthesis class W protein; Probable acetyltransferase, which acetylates the inositol ring of phosphatidylinositol during biosynthesis of GPI-anchor.
    
 0.769
RIMS4
Regulating synaptic membrane exocytosis 4.
      
 0.765
PCYOX1
Prenylcysteine oxidase 1.
      
 0.759
HERC6
HECT and RLD domain containing E3 ubiquitin protein ligase family member 6.
      
 0.749
ACIN1
Apoptotic chromatin condensation inducer 1.
      
 0.706
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.