STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYPD1LY6/PLAUR domain containing 1. (162 aa)    
Predicted Functional Partners:
CALB1
Calbindin 1.
   
  
 0.550
NTNG1
Netrin G1.
      
 0.528
DAPL1
Death associated protein like 1.
      
 0.526
DEFB124
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
      
 0.518
VAT1L
Vesicle amine transport 1 like.
      
 0.515
HMGCLL1
3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1.
      
 0.485
C1orf198
Chromosome 1 open reading frame 198.
      
 0.479
CCDC102B
Coiled-coil domain containing 102B.
      
 0.479
NDNF
Neuron derived neurotrophic factor.
      
 0.457
BRINP3
BMP/retinoic acid inducible neural specific 3.
      
 0.452
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.