STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM259Transmembrane protein 259. (584 aa)    
Predicted Functional Partners:
CACHD1
Cache domain containing 1.
      
 0.847
SMPDL3B
Acid sphingomyelinase-like phosphodiesterase.
      
 0.778
RNF185
Ring finger protein 185.
    
 
 0.760
TMED7
GOLD domain-containing protein.
      
 0.759
CAPNS1
Calpain small subunit 1.
   
  
 0.753
STT3A
STT3 oligosaccharyltransferase complex catalytic subunit A.
      
 0.750
GGCX
Gamma-glutamyl carboxylase.
      
 0.750
C6orf120
Chromosome 6 open reading frame 120.
      
 0.749
TMUB1
Transmembrane and ubiquitin like domain containing 1.
    
 
 0.744
NSFL1C
NSFL1 cofactor.
      
 0.715
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.