STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MEIG1Meiosis/spermiogenesis associated 1. (88 aa)    
Predicted Functional Partners:
LOC100473656
Uncharacterized protein.
   
  
 0.826
PACRG-2
Uncharacterized protein.
    
 
 0.804
PACRG
Uncharacterized protein.
    
 
 0.804
PACRGL
Parkin coregulated like.
    
 
 0.609
RTTN
Rotatin.
      
 0.534
NCAN
Neurocan.
      
 0.514
ROPN1L
Rhophilin associated tail protein 1 like.
   
  
 0.512
PIFO
Primary cilia formation.
   
  
 0.477
CFAP36
Cilia and flagella associated protein 36.
      
 0.461
SPAG6
Sperm associated antigen 6.
      
 0.435
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.