STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAPC1Small nuclear RNA activating complex polypeptide 1. (355 aa)    
Predicted Functional Partners:
SNAPC3
Small nuclear RNA activating complex polypeptide 3.
   
 0.997
SNAPC4
Uncharacterized protein.
    
 0.995
SNAPC5
Small nuclear RNA activating complex polypeptide 5.
    
 0.989
SNAPC2
Small nuclear RNA activating complex polypeptide 2.
    
 0.970
GTF2B
General transcription factor IIB.
    
 0.877
GTF2A2
General transcription factor IIA subunit 2.
    
  0.794
TBPL2
Uncharacterized protein.
   
 0.791
TBP
TATA-box binding protein.
   
 0.791
GTF2A1
General transcription factor IIA subunit 1.
    
  0.770
MFF
Mitochondrial fission factor.
      
 0.706
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.